Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMOB0460COF family HAD hydrolase protein; COG0561; expression validated by proteogenomic mapping: 17 unique peptides covering 47.2% of sequence. (284 aa)    
Predicted Functional Partners:
MMOB0450
COF family HAD hydrolase protein; COG0561; expression validated by proteogenomic mapping: 41 unique peptides covering 75.2% of sequence.
 
    
0.836
MMOB0470
COF family HAD hydrolase protein; COG0561; expression validated by proteogenomic mapping: 7 unique peptides covering 33.1% of sequence.
 
    
0.711
MMOB1220
COF family HAD hydrolase protein; COG0561; expression validated by proteogenomic mapping: 18 unique peptides covering 59.6% of sequence.
  
     0.711
lysS
lysyl-tRNA synthetase; COG1190; expression validated by proteogenomic mapping: 39 unique peptides covering 60.6% of sequence; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.681
MMOB0430
Unspecified transport or permease protein; COG0477; expression validated by proteogenomic mapping: 1 unique peptides covering 3% of sequence.
       0.469
potC
Spermidine/putrescine ABC transporter permease protein; COG1177; expression validated by proteogenomic mapping: 2 unique peptides covering 6.1% of sequence.
  
    0.451
potB
Spermidine/putrescine ABC transporter permease protein; COG1176; expression not validated.
  
    0.444
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
    0.442
potD
Probable spermidine/putrescine/ABC transporter substrate binding protein; Expression validated by proteogenomic mapping: 25 unique peptides covering 50.1% of sequence.
  
    0.441
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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