Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nifSAminotransferase protein S homolog; COG0520; expression validated by proteogenomic mapping: 17 unique peptides covering 42.4% of sequence. (389 aa)    
Predicted Functional Partners:
nifU
Aminotransferase protein U homolog; COG0822; expression validated by proteogenomic mapping: 2 unique peptides covering 12% of sequence.
  
 
 0.997
trxB
Thioredoxin reductase; COG0492; expression validated by proteogenomic mapping: 51 unique peptides covering 78.5% of sequence.
  
 
  0.912
MMOB0800
Putative rRNA methylase; COG1189; expression validated by proteogenomic mapping: 1 unique peptides covering 5% of sequence.
       0.813
MMOB4170
Expressed protein; COG0739; expression validated by proteogenomic mapping: 26 unique peptides covering 53.6% of sequence.
  
  
 0.458
pmsR-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.428
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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