| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MMOB0890 | recD | MMOB0890 | MMOB0930 | HIT-family hydrolase protein; COG0537; expression validated by proteogenomic mapping: 7 unique peptides covering 54.1% of sequence. | Exodeoxyribonuclease V alpha chain; COG0507; expression validated by proteogenomic mapping: 4 unique peptides covering 8.4% of sequence. | 0.441 |
| MMOB0890 | serS | MMOB0890 | MMOB0920 | HIT-family hydrolase protein; COG0537; expression validated by proteogenomic mapping: 7 unique peptides covering 54.1% of sequence. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.502 |
| dnaN | pcrA1 | MMOB0020 | MMOB4890 | DNA polymerase III beta chain; COG0592; expression validated by proteogenomic mapping: 18 unique peptides covering 44.2% of sequence. | ATP-dependent DNA helicase; COG0210; expression validated by proteogenomic mapping: 7 unique peptides covering 14% of sequence. | 0.805 |
| dnaN | polA | MMOB0020 | MMOB4880 | DNA polymerase III beta chain; COG0592; expression validated by proteogenomic mapping: 18 unique peptides covering 44.2% of sequence. | DNA polymerase I; COG0258; expression validated by proteogenomic mapping: 13 unique peptides covering 33.9% of sequence. | 0.992 |
| dnaN | recA | MMOB0020 | MMOB5150 | DNA polymerase III beta chain; COG0592; expression validated by proteogenomic mapping: 18 unique peptides covering 44.2% of sequence. | Recombination protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.910 |
| dnaN | recD | MMOB0020 | MMOB0930 | DNA polymerase III beta chain; COG0592; expression validated by proteogenomic mapping: 18 unique peptides covering 44.2% of sequence. | Exodeoxyribonuclease V alpha chain; COG0507; expression validated by proteogenomic mapping: 4 unique peptides covering 8.4% of sequence. | 0.758 |
| dnaN | ssb | MMOB0020 | MMOB2260 | DNA polymerase III beta chain; COG0592; expression validated by proteogenomic mapping: 18 unique peptides covering 44.2% of sequence. | Single strand binding protein; COG0629; expression validated by proteogenomic mapping: 13 unique peptides covering 44% of sequence. | 0.486 |
| dnaN | topA | MMOB0020 | MMOB0820 | DNA polymerase III beta chain; COG0592; expression validated by proteogenomic mapping: 18 unique peptides covering 44.2% of sequence. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.647 |
| pcrA1 | dnaN | MMOB4890 | MMOB0020 | ATP-dependent DNA helicase; COG0210; expression validated by proteogenomic mapping: 7 unique peptides covering 14% of sequence. | DNA polymerase III beta chain; COG0592; expression validated by proteogenomic mapping: 18 unique peptides covering 44.2% of sequence. | 0.805 |
| pcrA1 | pmsR-2 | MMOB4890 | MMOB4950 | ATP-dependent DNA helicase; COG0210; expression validated by proteogenomic mapping: 7 unique peptides covering 14% of sequence. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.632 |
| pcrA1 | polA | MMOB4890 | MMOB4880 | ATP-dependent DNA helicase; COG0210; expression validated by proteogenomic mapping: 7 unique peptides covering 14% of sequence. | DNA polymerase I; COG0258; expression validated by proteogenomic mapping: 13 unique peptides covering 33.9% of sequence. | 0.702 |
| pcrA1 | recA | MMOB4890 | MMOB5150 | ATP-dependent DNA helicase; COG0210; expression validated by proteogenomic mapping: 7 unique peptides covering 14% of sequence. | Recombination protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.812 |
| pcrA1 | recD | MMOB4890 | MMOB0930 | ATP-dependent DNA helicase; COG0210; expression validated by proteogenomic mapping: 7 unique peptides covering 14% of sequence. | Exodeoxyribonuclease V alpha chain; COG0507; expression validated by proteogenomic mapping: 4 unique peptides covering 8.4% of sequence. | 0.430 |
| pcrA1 | topA | MMOB4890 | MMOB0820 | ATP-dependent DNA helicase; COG0210; expression validated by proteogenomic mapping: 7 unique peptides covering 14% of sequence. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.793 |
| pmsR-2 | pcrA1 | MMOB4950 | MMOB4890 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | ATP-dependent DNA helicase; COG0210; expression validated by proteogenomic mapping: 7 unique peptides covering 14% of sequence. | 0.632 |
| pmsR-2 | polA | MMOB4950 | MMOB4880 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | DNA polymerase I; COG0258; expression validated by proteogenomic mapping: 13 unique peptides covering 33.9% of sequence. | 0.637 |
| pmsR-2 | recA | MMOB4950 | MMOB5150 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Recombination protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.485 |
| pmsR-2 | recD | MMOB4950 | MMOB0930 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Exodeoxyribonuclease V alpha chain; COG0507; expression validated by proteogenomic mapping: 4 unique peptides covering 8.4% of sequence. | 0.455 |
| pmsR-2 | serS | MMOB4950 | MMOB0920 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.437 |
| pmsR-2 | topA | MMOB4950 | MMOB0820 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.414 |