Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ushA5'-nucleotidase; COG0737; expression validated by proteogenomic mapping: 30 unique peptides covering 41.4% of sequence; Belongs to the 5'-nucleotidase family. (748 aa)    
Predicted Functional Partners:
deoD
Purine-nucleoside phosphorylase; COG0813; expression validated by proteogenomic mapping: 28 unique peptides covering 69.1% of sequence.
    
 0.551
ald
Alanine dehydrogenase; COG0686; expression validated by proteogenomic mapping: 49 unique peptides covering 79.3% of sequence.
  
    0.525
MMOB4170
Expressed protein; COG0739; expression validated by proteogenomic mapping: 26 unique peptides covering 53.6% of sequence.
  
  
 0.508
arsR
Arsenical resistance operon repressor family protein; COG0640; expression validated by proteogenomic mapping: 13 unique peptides covering 78.7% of sequence.
 
   
 0.491
ecm27
Ca2+/Na+ antiporter; COG0530; expression validated by proteogenomic mapping: 1 unique peptides covering 3.4% of sequence.
 
    0.467
sps1-2
Serine/threonine protein kinase; COG0515; expression validated by proteogenomic mapping: 27 unique peptides covering 51.8% of sequence.
     
 0.466
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
  
 0.450
hisS
histidyl-tRNA synthetase; COG0124; expression validated by proteogenomic mapping: 12 unique peptides covering 22.5% of sequence.
     
 0.438
MMOB1050
P42 expressed protein; Expression validated by proteogenomic mapping: 15 unique peptides covering 37.6% of sequence.
     
 0.432
secA
Preprotein translocase secA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
  
  
 0.415
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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