STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppFOligopeptide ABC transporter ATP-binding protein; COG1124; expression validated by proteogenomic mapping: 20 unique peptides covering 28.1% of sequence. (850 aa)    
Predicted Functional Partners:
oppB
Oligopeptide ABC transporter permease protein; COG0601; expression validated by proteogenomic mapping: 2 unique peptides covering 6.3% of sequence.
 
 0.976
oppC
Oligopeptide ABC transporter permease protein; COG1173; expression validated by proteogenomic mapping: 4 unique peptides covering 11.2% of sequence.
 
 
 0.975
oppF-2
Oligopeptide ABC transporter ATP-binding protein; COG1123; expression validated by proteogenomic mapping: 17 unique peptides covering 24.9% of sequence; Belongs to the ABC transporter superfamily.
 
 
0.960
pgk
Bidomainal protein; N-terminal phosphoglycerate kinase domain and C-terminal oligopeptide ABC transporter ATPase domain; COG0126; COG0444; expression validated by proteogenomic mapping: 29 unique peptides covering 39.3% of sequence; Belongs to the phosphoglycerate kinase family.
  
  
  0.925
MMOB1560
Conserved hypothetical membrane protein; Expression not validated.
       0.778
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.774
rbfA
Ribosome-binding factor a; COG0858; expression validated by proteogenomic mapping: 7 unique peptides covering 43.8% of sequence.
  
    0.649
rlmH
Expressed protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.632
gidA
Glucose inhibited division protein a; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.630
nusA
N-utilization substance protein a; Participates in both transcription termination and antitermination.
  
    0.610
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.