Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MMOB1910Conserved expressed protein; COG0217; expression validated by proteogenomic mapping: 12 unique peptides covering 34.4% of sequence. (244 aa)    
Predicted Functional Partners:
nadE
NH(3)-dependent NAD(+) synthetase; COG0171; expression validated by proteogenomic mapping: 6 unique peptides covering 20.4% of sequence.
   
   0.839
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
 
   0.830
rplS
50S ribosomal protein l19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
  
   0.789
galE
Udp-glucose 4-epimerase; COG1087; expression validated by proteogenomic mapping: 26 unique peptides covering 48.5% of sequence; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.773
aspS
aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
 
  
 0.773
rplQ
50S ribosomal protein l17; COG0203; expression validated by proteogenomic mapping: 8 unique peptides covering 47.5% of sequence.
  
   0.751
rpmA
50S ribosomal protein l27; COG0211; expression validated by proteogenomic mapping: 9 unique peptides covering 57.6% of sequence; Belongs to the bacterial ribosomal protein bL27 family.
  
   0.714
hemK
Protoporphyrinogen oxidase; COG2890; expression validated by proteogenomic mapping: 2 unique peptides covering 5.5% of sequence.
     
 0.579
rpmF
50S ribosomal protein l32; COG0333; expression validated by proteogenomic mapping: 2 unique peptides covering 31.3% of sequence; Belongs to the bacterial ribosomal protein bL32 family.
  
   0.573
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
  
 0.560
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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