Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMOB3020Hypothetical protein; Expression not validated. (469 aa)    
Predicted Functional Partners:
atpD-3
ATP synthase beta chain; One of multiple copies; COG0055; expression validated by proteogenomic mapping: 21 unique peptides covering 44.2% of sequence.
       0.773
atpA-3
ATP synthase alpha chain; One of multiple copies; COG0056; expression validated by proteogenomic mapping: 15 unique peptides covering 28.7% of sequence.
       0.773
MMOB2980
Expressed protein; Expression validated by proteogenomic mapping: 9 unique peptides covering 12.9% of sequence.
       0.773
MMOB2990
Expressed protein; Expression validated by proteogenomic mapping: 1 unique peptides covering 6.7% of sequence.
       0.773
MMOB3000
Expressed protein; Expression validated by proteogenomic mapping: 1 unique peptides covering 5.9% of sequence.
       0.773
MMOB3010
Expressed protein; Expression validated by proteogenomic mapping: 7 unique peptides covering 38.5% of sequence.
       0.773
MMOB3030
Predicted phosphoesterase protein; COG0622; expression validated by proteogenomic mapping: 4 unique peptides covering 26.1% of sequence.
       0.564
glpD
Glycerol-3-phosphate dehydrogenase; COG0578; expression validated by proteogenomic mapping: 9 unique peptides covering 35.8% of sequence.
       0.461
glpF
Glycerol uptake facilitator protein; COG0580; expression validated by proteogenomic mapping: 1 unique peptides covering 4.3% of sequence; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.431
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
       0.431
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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