Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMOB3100Expressed protein; Expression validated by proteogenomic mapping: 9 unique peptides covering 18.1% of sequence. (259 aa)    
Predicted Functional Partners:
MMOB3060
Expressed protein; Expression validated by proteogenomic mapping: 6 unique peptides covering 17.6% of sequence.
       0.718
MMOB3070
Expressed protein; Expression validated by proteogenomic mapping: 4 unique peptides covering 9.3% of sequence.
       0.718
MMOB3080
Expressed protein; Expression validated by proteogenomic mapping: 9 unique peptides covering 38.8% of sequence.
       0.718
metK
S-adenosylmethionine synthetase; COG0192; expression validated by proteogenomic mapping: 23 unique peptides covering 50% of sequence; Belongs to the AdoMet synthase family.
       0.718
MMOB3110
Internal repeat-containing expressed protein; Expression validated by proteogenomic mapping: 71 unique peptides covering 65.6% of sequence.
      
0.603
pncB
Nicotinic acid phosphoribosyltransferase; COG1488; expression validated by proteogenomic mapping: 25 unique peptides covering 72.1% of sequence; Belongs to the NAPRTase family.
       0.603
snf2
Swf/snf family helicase-like protein; COG0553; expression validated by proteogenomic mapping: 17 unique peptides covering 20.7% of sequence.
       0.415
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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