Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMOB3270NADPH-linked nitro/flavin oxidoreductase; COG0778; expression validated by proteogenomic mapping: 50 unique peptides covering 77.3% of sequence; Belongs to the flavin oxidoreductase frp family. (255 aa)    
Predicted Functional Partners:
ribF
FAD synthase (riboflavin kinase/biosynthesis protein); COG0196; expression validated by proteogenomic mapping: 3 unique peptides covering 13.5% of sequence.
    
 0.932
pmsR-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.557
ribA
Riboflavin biosynthesis protein; COG0807; expression validated by proteogenomic mapping: 9 unique peptides covering 20.4% of sequence.
  
 
 0.512
mvspD
Variable surface protein mvspD; Expression validated by proteogenomic mapping: 40 unique peptides covering 62.2% of sequence.
       0.474
trxB
Thioredoxin reductase; COG0492; expression validated by proteogenomic mapping: 51 unique peptides covering 78.5% of sequence.
  
 
 0.407
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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