Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MMOB3490 | acpD | MMOB3490 | MMOB3510 | Hypothetical protein; Expression not validated. | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.603 |
| MMOB3490 | cdd | MMOB3490 | MMOB3470 | Hypothetical protein; Expression not validated. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.634 |
| MMOB3490 | era | MMOB3490 | MMOB3460 | Hypothetical protein; Expression not validated. | GTP-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.634 |
| MMOB3490 | mdlB | MMOB3490 | MMOB3520 | Hypothetical protein; Expression not validated. | Multidrug ABC transporter ATP-binding protein; COG1132; expression validated by proteogenomic mapping: 1 unique peptides covering 2.9% of sequence. | 0.406 |
| MMOB3490 | sunT | MMOB3490 | MMOB3500 | Hypothetical protein; Expression not validated. | Unspecified toxin/drug ABC transporter ATP-binding and permease protein; COG2274; expression not validated. | 0.773 |
| MMOB3490 | ybeY | MMOB3490 | MMOB3480 | Hypothetical protein; Expression not validated. | Putative metal binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.773 |
| MMOB3845 | era | MMOB3845 | MMOB3460 | Rec0. | GTP-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.620 |
| MMOB3845 | potD | MMOB3845 | MMOB0510 | Rec0. | Probable spermidine/putrescine/ABC transporter substrate binding protein; Expression validated by proteogenomic mapping: 25 unique peptides covering 50.1% of sequence. | 0.771 |
| MMOB3845 | sunT | MMOB3845 | MMOB3500 | Rec0. | Unspecified toxin/drug ABC transporter ATP-binding and permease protein; COG2274; expression not validated. | 0.606 |
| MMOB3845 | ybeY | MMOB3845 | MMOB3480 | Rec0. | Putative metal binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.487 |
| acpD | MMOB3490 | MMOB3510 | MMOB3490 | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Hypothetical protein; Expression not validated. | 0.603 |
| acpD | cdd | MMOB3510 | MMOB3470 | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.541 |
| acpD | era | MMOB3510 | MMOB3460 | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | GTP-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.504 |
| acpD | mdlB | MMOB3510 | MMOB3520 | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Multidrug ABC transporter ATP-binding protein; COG1132; expression validated by proteogenomic mapping: 1 unique peptides covering 2.9% of sequence. | 0.508 |
| acpD | sunT | MMOB3510 | MMOB3500 | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Unspecified toxin/drug ABC transporter ATP-binding and permease protein; COG2274; expression not validated. | 0.603 |
| acpD | ybeY | MMOB3510 | MMOB3480 | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Putative metal binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.603 |
| cdd | MMOB3490 | MMOB3470 | MMOB3490 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Hypothetical protein; Expression not validated. | 0.634 |
| cdd | acpD | MMOB3470 | MMOB3510 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.541 |
| cdd | era | MMOB3470 | MMOB3460 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | GTP-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.941 |
| cdd | sunT | MMOB3470 | MMOB3500 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Unspecified toxin/drug ABC transporter ATP-binding and permease protein; COG2274; expression not validated. | 0.707 |
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