Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMOB3930Hypothetical protein; COG1554; expression not validated. (139 aa)    
Predicted Functional Partners:
pgmB
Beta-phosphoglucomutase; COG0637; expression validated by proteogenomic mapping: 12 unique peptides covering 41.3% of sequence.
 
  
 0.762
malE-2
Truncated maltose-binding protein; N-terminal portion; COG2182; expression validated by proteogenomic mapping: 76 unique peptides covering 72.4% of sequence.
  
    0.561
malE
Truncated maltose-binding protein; C-terminal portion; COG2182; expression validated by proteogenomic mapping: 47 unique peptides covering 51.6% of sequence.
  
    0.551
malC
Maltodextrin ABC transporter permease protein; COG1175; expression validated by proteogenomic mapping: 1 unique peptides covering 3.7% of sequence.
  
  
 0.506
pulA
Pullulanase; COG1523; expression validated by proteogenomic mapping: 10 unique peptides covering 16.8% of sequence; Belongs to the glycosyl hydrolase 13 family.
     
 0.412
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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