Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MMOB4450Conserved hypothetical protein; COG3763; expression validated by proteogenomic mapping: 1 unique peptides covering 14.7% of sequence. (75 aa)    
Predicted Functional Partners:
whiA
Expressed protein; Involved in cell division and chromosome segregation.
  
    0.752
MMOB4430
Conserved hypothetical membrane protein; Possibly interacts with ftsH; COG0670; expression not validated.
       0.599
recU
Penicillin-binding protein-related factor A putative recombinase; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
     0.535
MMOB4420
Expressed protein; Expression validated by proteogenomic mapping: 35 unique peptides covering 47.9% of sequence.
       0.444
rpsO
30S ribosomal protein s15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
   
    0.430
rpsT
30S ribosomal protein s20; Binds directly to 16S ribosomal RNA.
   
    0.419
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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