Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arsRArsenical resistance operon repressor family protein; COG0640; expression validated by proteogenomic mapping: 13 unique peptides covering 78.7% of sequence. (108 aa)    
Predicted Functional Partners:
rimP
Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
 
     0.569
pmsR-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.532
ushA
5'-nucleotidase; COG0737; expression validated by proteogenomic mapping: 30 unique peptides covering 41.4% of sequence; Belongs to the 5'-nucleotidase family.
 
   
 0.491
MMOB0770
Expressed protein; Expression validated by proteogenomic mapping: 3 unique peptides covering 6.4% of sequence.
 
   
 0.482
pstA
Phosphate ABC transporter permease protein; COG0581; COG0573; expression not validated.
     
 0.470
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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