Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMOB4470Hypothetical protein; Expression not validated. (136 aa)    
Predicted Functional Partners:
oppF-2
Oligopeptide ABC transporter ATP-binding protein; COG1123; expression validated by proteogenomic mapping: 17 unique peptides covering 24.9% of sequence; Belongs to the ABC transporter superfamily.
       0.714
pgk
Bidomainal protein; N-terminal phosphoglycerate kinase domain and C-terminal oligopeptide ABC transporter ATPase domain; COG0126; COG0444; expression validated by proteogenomic mapping: 29 unique peptides covering 39.3% of sequence; Belongs to the phosphoglycerate kinase family.
       0.714
oppC
Oligopeptide ABC transporter permease protein; COG1173; expression validated by proteogenomic mapping: 4 unique peptides covering 11.2% of sequence.
       0.714
oppB
Oligopeptide ABC transporter permease protein; COG0601; expression validated by proteogenomic mapping: 2 unique peptides covering 6.3% of sequence.
       0.714
MMOB4520
Putative membrane protein; Expression validated by proteogenomic mapping: 58 unique peptides covering 66.2% of sequence.
       0.704
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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