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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrA2Chromate transport protein; COG2059; expression not validated. (217 aa)    
Predicted Functional Partners:
chrA1
Chromate transport protein; COG2059; expression not validated.
 
     0.957
licA
Predicted choline kinase; Involved in LPS biosynthesis; COG0510; expression validated by proteogenomic mapping: 5 unique peptides covering 23.2% of sequence.
  
     0.680
MMOB0430
Unspecified transport or permease protein; COG0477; expression validated by proteogenomic mapping: 1 unique peptides covering 3% of sequence.
 
     0.590
MMOB0420
Unspecified transport or permease protein; COG0477; expression validated by proteogenomic mapping: 3 unique peptides covering 5.3% of sequence.
 
     0.583
MMOB4590
Possibly protein prenyltransferase; expression validated by proteogenomic mapping: 3 unique peptides covering 8.2% of sequence.
       0.517
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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