Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MMOB5180Hypothetical metal-dependent hydrolase; COG1451; expression not validated. (230 aa)    
Predicted Functional Partners:
MMOB5190
Expressed protein; Expression validated by proteogenomic mapping: 8 unique peptides covering 26.7% of sequence.
       0.795
rpsT
30S ribosomal protein s20; Binds directly to 16S ribosomal RNA.
       0.583
pheT
phenylalanyl-tRNA synthetase beta chain; COG0072; expression validated by proteogenomic mapping: 17 unique peptides covering 31.3% of sequence; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.542
mgs1
ATPase; Related to the helicase subunit of the Holliday junction resolvase; COG2256; expression validated by proteogenomic mapping: 4 unique peptides covering 13.2% of sequence.
       0.533
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.449
MMOB5220
Putative esterase or lipase protein; COG2755; expression validated by proteogenomic mapping: 8 unique peptides covering 9.9% of sequence.
       0.428
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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