Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMOB5750Expressed protein; Expression validated by proteogenomic mapping: 11 unique peptides covering 32% of sequence. (353 aa)    
Predicted Functional Partners:
lemA
Expressed protein; COG1704; expression validated by proteogenomic mapping: 24 unique peptides covering 61.9% of sequence.
       0.768
coaD
Putative phosphopantetheine adenylyltransferase; COG0669; expression validated by proteogenomic mapping: 4 unique peptides covering 32.4% of sequence.
       0.623
MMOB5730
Expressed protein; Expression validated by proteogenomic mapping: 17 unique peptides covering 22.6% of sequence.
       0.603
coaE
Hypothetical dephospho-CoA kinase; COG0237; expression not validated.
       0.478
uvrB
Excinuclease ABC helicase subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits di [...]
       0.434
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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