Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
udgAUDP-glucose dehydrogenase; COG1004; expression validated by proteogenomic mapping: 8 unique peptides covering 25% of sequence. (252 aa)    
Predicted Functional Partners:
galU
UTP-glucose-1-phosphate uridylyltransferase; COG1210; expression validated by proteogenomic mapping: 32 unique peptides covering 67.8% of sequence.
  
 0.961
galE
Udp-glucose 4-epimerase; COG1087; expression validated by proteogenomic mapping: 26 unique peptides covering 48.5% of sequence; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.941
glf
UDP-galactopyranose mutase; COG0562; expression validated by proteogenomic mapping: 29 unique peptides covering 60.3% of sequence.
  
  
 0.920
MMOB5990
Hypothetical protein; Expression not validated.
  
  
 0.806
ribA
Riboflavin biosynthesis protein; COG0807; expression validated by proteogenomic mapping: 9 unique peptides covering 20.4% of sequence.
  
  
 0.796
MMOB5980
Expressed protein; Expression validated by proteogenomic mapping: 7 unique peptides covering 11.3% of sequence.
       0.773
MMOB6000
Hypothetical protein; Expression not validated.
       0.773
wcaG
NAD-dependent nucleoside-diphosphate-sugar epimerase; COG0451; expression validated by proteogenomic mapping: 48 unique peptides covering 79.4% of sequence.
  
 
 0.542
pgi
Glucose-6-phosphate isomerase; COG0166; expression validated by proteogenomic mapping: 41 unique peptides covering 65.1% of sequence.
  
 
 0.533
polA
DNA polymerase I; COG0258; expression validated by proteogenomic mapping: 13 unique peptides covering 33.9% of sequence.
     
 0.413
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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