Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMOB6220Expressed protein; Expression validated by proteogenomic mapping: 21 unique peptides covering 36.8% of sequence. (459 aa)    
Predicted Functional Partners:
MMOB6230
Unspecified ABC transporter ATP binding protein; COG0488; expression validated by proteogenomic mapping: 39 unique peptides covering 47.4% of sequence.
       0.773
rnhB-2
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.773
MMOB6210
Predicted hydrolase; Metallo-beta-lactamase superfamily; COG0595; expression validated by proteogenomic mapping: 17 unique peptides covering 33.9% of sequence.
       0.722
nox
NADH oxidase; COG0446; expression validated by proteogenomic mapping: 70 unique peptides covering 81% of sequence.
       0.433
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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