STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_0021Putrescine ABC transporter putrescine-binding protein PotF; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (367 aa)    
Predicted Functional Partners:
ADINL_0018
Putrescine transport system permease protein PotI; TCDB 3.A.1.11.2.
 
 0.999
ADINL_2539
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
 
 0.995
ADINL_0019
Putrescine transport system permease protein PotH; TCDB 3.A.1.11.2.
 
 0.990
potA
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.981
ADINL_0265
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
 
 0.979
ADINL_2822
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
 
 0.979
ADINL_2540
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
 
 0.964
ADINL_0266
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
 
 0.943
ADINL_2823
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
 
 0.931
ADINL_2541
Putrescine transport ATP-binding protein PotA; TCDB 3.A.1.11.1; Belongs to the ABC transporter superfamily.
 
 0.894
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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