STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_0231Putative LmbE-like protein. (173 aa)    
Predicted Functional Partners:
ADINL_0226
Methionyl-tRNA formyltransferase.
 
    0.879
ADINL_0228
N-acetylneuraminate synthase.
 
   
 0.782
ADINL_0225
Pseudaminic acid cytidylyltransferase.
 
    0.750
ADINL_0216
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.728
ADINL_2367
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.728
ADINL_0222
Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.722
ADINL_0221
UDP-N-acetylglucosamine 4,6-dehydratase.
 
     0.680
ADINL_2676
Demethylmenaquinone methyltransferase.
    
 0.631
ADINL_3085
2-methylaconitate cis-trans isomerase.
    
 0.606
ADINL_0223
Spore coat polysaccharide biosynthesis protein spsF.
 
     0.599
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.