STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_0325TRAP-type C4-dicarboxylate transport system, small permease component. (154 aa)    
Predicted Functional Partners:
ADINL_0324
TRAP transporter solute receptor, unknown substrate 6.
 
    0.911
ADINL_0326
TRAP-type C4-dicarboxylate transport system, large permease component.
 
  
 0.864
ADINL_2178
TRAP-type C4-dicarboxylate transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.773
ADINL_1259
TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6.
  
     0.742
ADINL_1258
TRAP transporter solute receptor, unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.733
ADINL_1107
TRAP transporter solute receptor, unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.705
ADINL_1260
TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6.
 
  
 0.679
ADINL_1111
TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6.
 
  
 0.658
ADINL_2176
TRAP-type C4-dicarboxylate transport system, large permease component.
 
  
 0.582
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.