STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_0544Hypothetical protein. (201 aa)    
Predicted Functional Partners:
ADINL_0538
Protein of avirulence locus ImpE.
       0.636
ADINL_0539
Uncharacterized protein ImpF.
       0.636
ADINL_0540
Protein ImpG/VasA.
       0.636
ADINL_0541
Uncharacterized protein ImpH/VasB.
       0.636
ADINL_0542
Serine/threonine protein kinase PrkC, regulator of stationary phase.
       0.636
ADINL_0543
ClpB protein; Belongs to the ClpA/ClpB family.
       0.636
ADINL_0537
Uncharacterized protein ImpC.
       0.619
ADINL_0535
Uncharacterized protein ImpB.
       0.611
ADINL_0536
Uncharacterized protein ImpC.
       0.611
ADINL_0534
Uncharacterized protein ImpA.
       0.591
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.