STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_0676MSHA biogenesis protein MshG. (408 aa)    
Predicted Functional Partners:
ADINL_0677
MSHA biogenesis protein MshE.
 
 0.992
ADINL_2458
Type IV fimbrial assembly, ATPase PilB.
 
 0.970
ADINL_0681
MSHA biogenesis protein MshI; Overlaps CDS with the same product name.
 
 
 
 0.948
ADINL_0674
MSHA pilin protein MshA.
 
  
 0.929
ADINL_0680
MSHA biogenesis protein MshI; Overlaps CDS with the same product name.
   
 
 0.911
ADINL_0675
Hypothetical protein.
  
  
 0.898
ADINL_0679
MSHA biogenesis protein MshJ.
 
  
 0.892
ADINL_2456
Leader peptidase (Prepilin peptidase); Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.892
ADINL_0673
MSHA pilin protein MshA.
 
  
 0.882
ADINL_0672
MSHA pilin protein MshA; Overlaps CDS with the same product name.
 
  
 0.878
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.