STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_0832Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. (310 aa)    
Predicted Functional Partners:
ADINL_0833
Hypothetical protein.
 
     0.848
ADINL_0783
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.726
ADINL_2675
Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family); Belongs to the LysR transcriptional regulatory family.
  
     0.720
ADINL_2093
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.688
ADINL_1402
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.685
ADINL_0569
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.645
ADINL_0831
SM-20-related protein.
       0.581
ADINL_2664
Hydrogen peroxide-inducible gene activator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.542
ADINL_2254
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.524
ADINL_1539
RuBisCO operon transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.517
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.