STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_1319Putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE. (261 aa)    
Predicted Functional Partners:
ADINL_1318
Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF.
 0.999
ADINL_1317
Putative L-lactate dehydrogenase, hypothetical protein subunit YkgG.
 
 
 0.989
ADINL_0564
Glycolate dehydrogenase, subunit GlcD.
 
 0.933
ADINL_2318
Succinate dehydrogenase iron-sulfur protein.
 
 
  0.911
ADINL_1741
Glutamate synthase [NADPH] large chain.
    
 0.852
ADINL_1405
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.801
ADINL_1105
Oxaloacetate decarboxylase alpha chain.
    
 0.741
ADINL_2201
Iron-sulfur cluster-binding protein.
    
 0.737
ADINL_2715
Iron-sulfur cluster-binding protein.
  
 
 0.725
ADINL_1996
Phosphate acetyltransferase.
  
 
 0.705
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.