STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_1339Hypothetical protein. (82 aa)    
Predicted Functional Partners:
ADINL_1338
Type I restriction-modification system, specificity subunit S.
  
  
 0.928
ADINL_1337
Type I restriction-modification system, DNA-methyltransferase subunit M.
  
  
 0.741
ADINL_1823
ATP-dependent DNA helicase recG.
  
    0.725
ADINL_1340
DNA helicase related protein.
       0.696
ADINL_1341
5'-nucleotidase.
       0.675
ADINL_1342
Hypothetical protein.
       0.563
ADINL_1334
Type I restriction-modification system, restriction subunit R.
       0.554
ADINL_1335
Hypothetical protein.
       0.554
ADINL_1336
DNA recombination protein RmuC.
       0.524
ADINL_0158
Type I restriction-modification system, DNA-methyltransferase subunit M.
  
  
 0.477
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.