STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_1544Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY. (295 aa)    
Predicted Functional Partners:
ADINL_2142
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 0.992
ADINL_0749
Phytochrome, two-component sensor histidine kinase; Cyanobacterial phytochrome B.
 
 0.977
ADINL_2143
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 0.974
ADINL_0445
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 0.964
ADINL_2473
Extracellular solute-binding protein, family 3/GGDEF domain protein.
 
 0.960
ADINL_2145
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.959
ADINL_1891
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.958
ADINL_0664
GGDEF domain protein.
 
0.955
ADINL_0847
Sensory box histidine kinase/response regulator.
 
 0.954
ADINL_0444
Sensory box histidine kinase/response regulator.
 
0.949
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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