STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmuVABC-type hemin transport system, ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (264 aa)    
Predicted Functional Partners:
ADINL_1601
Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.999
ADINL_1389
Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.994
ADINL_1388
Vitamin B12 ABC transporter, B12-binding component BtuF.
  
 0.988
ADINL_1600
Periplasmic hemin-binding protein.
 
 0.988
ADINL_1603
Pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein.
 
  
 0.850
ADINL_1638
Petrobactin ABC transporter, permease protein I; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.764
ADINL_1598
TonB-dependent hemin, ferrichrome receptor.
 
  
 0.747
ADINL_1599
Putative heme iron utilization protein.
 
     0.678
ADINL_1605
Putative Ton-B dependent hemine receptor.
  
  
 0.670
ADINL_1442
Hemophore HasA outer membrane receptor HasR; Iron siderophore receptor protein.
 
  
 0.665
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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