STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_1736Type IV pilus biogenesis protein PilP. (178 aa)    
Predicted Functional Partners:
ADINL_1737
Type IV pilus biogenesis protein PilQ.
 
 
 0.998
ADINL_1735
Type IV pilus biogenesis protein PilO.
 
 
 0.997
ADINL_1734
Type IV pilus biogenesis protein PilN.
 
 
 0.994
ADINL_1733
Type IV pilus biogenesis protein PilM.
 
 
 0.982
ADINL_0071
Hypothetical protein.
 
 
   0.903
ADINL_0680
MSHA biogenesis protein MshI; Overlaps CDS with the same product name.
  
 
 0.890
ADINL_1745
Type IV fimbrial biogenesis protein PilW.
  
  
 0.820
ADINL_1746
Type IV fimbrial biogenesis protein PilV.
  
  
 0.819
ADINL_1673
Type IV pilus biogenesis protein PilZ.
  
   
 0.806
ADINL_1808
Type IV fimbrial biogenesis protein FimT.
  
  
 0.779
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.