STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_1812Outer membrane receptor for ferrienterochelin and colicins. (834 aa)    
Predicted Functional Partners:
ADINL_1625
Putative protein-transmembrane prediction; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.740
ADINL_1811
Hypothetical protein.
       0.739
ADINL_0734
Hemolysin-type calcium binding protein.
 
 
 0.712
ADINL_2847
Hypothetical protein.
  
 
 0.676
ADINL_0667
MSHA biogenesis protein MshQ.
    
 
 0.553
ADINL_1414
Hypothetical protein.
    
 
 0.553
ADINL_2384
T1SS secreted agglutinin RTX.
    
 
 0.553
ADINL_1125
Ribosomal RNA methyltransferase.
  
 
 0.550
ADINL_1591
Hypothetical protein.
    
 
 0.548
ADINL_2878
Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis.
    
 
 0.548
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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