STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_1908Ammonium transporter. (458 aa)    
Predicted Functional Partners:
ADINL_0969
Nitrogen regulatory protein P-II.
  
 0.922
ADINL_0972
Nitrogen regulatory protein P-II.
  
 0.922
ADINL_0975
Putative nitrogen regulatory protein P-II.
  
 0.922
ADINL_1741
Glutamate synthase [NADPH] large chain.
 
  
 0.847
ADINL_0301
Sensory box histidine kinase/response regulator.
  
 0.712
ADINL_2145
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
    
 0.700
ADINL_1935
Sensory box histidine kinase/response regulator.
  
 0.686
ADINL_1909
Hypothetical protein.
       0.680
ADINL_1211
Glutamate synthase [NADPH] putative GlxC chain.
 
  
 0.679
ADINL_1212
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
 
   
 0.662
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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