STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_2469Lysine-arginine-ornithine-binding periplasmic protein precursor; TCDB 3.A.1.3.1; Belongs to the bacterial solute-binding protein 3 family. (253 aa)    
Predicted Functional Partners:
ADINL_2467
Amino acid ABC transporter, permease protein.
 
 0.993
ADINL_2468
Arginine ABC transporter, permease protein ArtQ.
 0.993
ADINL_2095
Putative transport system permease protein.
 0.982
ADINL_0772
Putative amino acid ABC transporter, permease protein.
 0.979
ADINL_2470
Histidine ABC transporter, ATP-binding protein HisP; TCDB 3.A.1.3.1.
 
 0.975
ADINL_2096
Amino acid ABC transporter.
 0.966
ADINL_2173
Ribose ABC transport system, permease protein RbsC; TCDB 3.A.1.2.1.
 0.958
ADINL_2172
Putative permease of ABC transporter.
 0.957
ADINL_0771
Amino acid ABC transporter, permease protein.
 0.954
ADINL_2097
Glutamine transport ATP-binding protein GlnQ; TCDB 3.A.1.3.2.
 0.895
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.