STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_2575Phosphoglycolate phosphatase. (221 aa)    
Predicted Functional Partners:
ADINL_1659
Hypothetical protein; Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C.
  
  
 
0.931
ADINL_2935
D-3-phosphoglycerate dehydrogenase.
    
 0.911
ADINL_0626
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.865
ADINL_0562
Glycolate dehydrogenase, iron-sulfur subunit GlcF.
    
 0.754
ADINL_1654
Glycolate dehydrogenase, subunit GlcD.
    
 0.730
ADINL_2574
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.723
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.706
ADINL_0510
Chorismate mutase I; Prephenate dehydratase.
  
 
  0.702
ADINL_0563
Glycolate dehydrogenase, FAD-binding subunit GlcE.
    
 0.702
ADINL_0564
Glycolate dehydrogenase, subunit GlcD.
    
 0.702
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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