Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ADINL_0124 | ADINL_2711 | Multicopper oxidase. | Transporter. | 0.488 |
ADINL_1339 | ADINL_2711 | Hypothetical protein. | Transporter. | 0.435 |
ADINL_2709 | ADINL_2710 | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; TCDB 3.A.1.7.1. | Hypothetical protein. | 0.613 |
ADINL_2709 | ADINL_2711 | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; TCDB 3.A.1.7.1. | Transporter. | 0.496 |
ADINL_2709 | ADINL_2712 | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; TCDB 3.A.1.7.1. | Redox-active disulfide protein 2. | 0.403 |
ADINL_2709 | ADINL_2713 | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; TCDB 3.A.1.7.1. | RNA polymerase sigma factor SigZ; Belongs to the sigma-70 factor family. ECF subfamily. | 0.417 |
ADINL_2710 | ADINL_2709 | Hypothetical protein. | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; TCDB 3.A.1.7.1. | 0.613 |
ADINL_2710 | ADINL_2711 | Hypothetical protein. | Transporter. | 0.572 |
ADINL_2710 | ADINL_2712 | Hypothetical protein. | Redox-active disulfide protein 2. | 0.493 |
ADINL_2710 | ADINL_2713 | Hypothetical protein. | RNA polymerase sigma factor SigZ; Belongs to the sigma-70 factor family. ECF subfamily. | 0.493 |
ADINL_2710 | ADINL_2714 | Hypothetical protein. | Hypothetical protein. | 0.430 |
ADINL_2711 | ADINL_0124 | Transporter. | Multicopper oxidase. | 0.488 |
ADINL_2711 | ADINL_1339 | Transporter. | Hypothetical protein. | 0.435 |
ADINL_2711 | ADINL_2709 | Transporter. | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; TCDB 3.A.1.7.1. | 0.496 |
ADINL_2711 | ADINL_2710 | Transporter. | Hypothetical protein. | 0.572 |
ADINL_2711 | ADINL_2712 | Transporter. | Redox-active disulfide protein 2. | 0.932 |
ADINL_2711 | ADINL_2713 | Transporter. | RNA polymerase sigma factor SigZ; Belongs to the sigma-70 factor family. ECF subfamily. | 0.707 |
ADINL_2711 | ADINL_2714 | Transporter. | Hypothetical protein. | 0.566 |
ADINL_2711 | ADINL_2715 | Transporter. | Iron-sulfur cluster-binding protein. | 0.431 |
ADINL_2712 | ADINL_2709 | Redox-active disulfide protein 2. | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; TCDB 3.A.1.7.1. | 0.403 |
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