STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_2746Ferric iron ABC transporter, permease protein. (567 aa)    
Predicted Functional Partners:
ADINL_2744
Ferric iron ABC transporter, iron-binding protein.
 
 
 0.998
ADINL_2745
Ferric iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.996
ADINL_1522
ABC transporter, substrate binding protein.
 
 
 0.957
phnW
2-aminoethylphosphonate:pyruvate aminotransferase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
 
     0.925
phnX
Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
 
     0.924
ADINL_2453
Ferric iron ABC transporter, iron-binding protein.
 
 
 0.872
ADINL_2772
Ferric iron ABC transporter, iron-binding protein.
  
 
 0.853
ADINL_2749
Permease of the drug/metabolite transporter (DMT) superfamily.
 
    0.845
ADINL_1520
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.796
ADINL_2541
Putrescine transport ATP-binding protein PotA; TCDB 3.A.1.11.1; Belongs to the ABC transporter superfamily.
 
 0.791
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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