STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_2773Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)    
Predicted Functional Partners:
ADINL_2774
Fe2+-dicitrate sensor, membrane component.
 0.951
ADINL_2021
Sigma factor RpoE negative regulatory protein RseA.
  
 
 0.887
ADINL_0495
Fe2+-dicitrate sensor, membrane component.
 0.864
ADINL_2752
Fe2+-dicitrate sensor, membrane component.
 0.860
ADINL_2754
Fe2+-dicitrate sensor, membrane component.
 0.859
ADINL_1436
Fe2+-dicitrate sensor, membrane component.
 0.858
ADINL_1440
Iron siderophore sensor protein.
 0.856
ADINL_1810
Fe2+-dicitrate sensor, membrane component.
 0.856
ADINL_2687
Iron siderophore sensor protein.
 
 0.856
ADINL_2772
Ferric iron ABC transporter, iron-binding protein.
       0.773
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.