STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_2872Cell wall endopeptidase, family M23/M37. (487 aa)    
Predicted Functional Partners:
ADINL_1095
Lipoprotein NlpD.
 
   
 0.759
ADINL_2645
Lipoprotein NlpD.
 
   
 0.746
ADINL_2871
Putative membrane protein YfcA.
       0.697
ADINL_1159
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.694
ADINL_0054
Zinc ABC transporter, periplasmic-binding protein ZnuA.
 
  
 0.693
ADINL_2870
Hypothetical protein.
       0.569
ADINL_1876
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
 
 0.564
ADINL_1732
Multimodular transpeptidase-transglycosylase.
 
   
 0.556
ADINL_1042
Flagellin protein FlaB; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 
 0.555
ADINL_2873
Putative signal-transduction protein containing cAMP-binding and CBS domains.
       0.467
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.