STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_2959Histone acetyltransferase HPA2 and related acetyltransferase. (155 aa)    
Predicted Functional Partners:
lipB
Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
 
      0.824
ADINL_1653
Hypothetical protein.
   
   0.792
argA
N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
    
 0.744
ADINL_0269
Transcriptional regulator, MerR family.
  
 
 0.634
ADINL_2958
Hypothetical protein.
       0.512
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.461
ADINL_0297
Chemotaxis protein CheC -- inhibitor of MCP methylation; Overlaps CDS with the same product name.
    
   0.430
ADINL_3101
Chemotaxis protein CheC -- inhibitor of MCP methylation.
    
   0.430
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.