Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KGE21038.1Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)    
Predicted Functional Partners:
KGE16704.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.547
KGE20450.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.537
KGE21037.1
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
KGE21039.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.519
KGE16690.1
Cation transporter; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
    
 
 0.504
KGE17333.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.503
KGE21036.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.495
KGE20210.1
Ion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.474
KGE16591.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.433
KGE19259.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.425
Your Current Organism:
Paenibacillus wynnii
NCBI taxonomy Id: 268407
Other names: CIP 108306, DSM 18334, LMG 22176, LMG:22176, P. wynnii, Paenibacillus wynnii Rodriguez-Diaz et al. 2005
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