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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGE18533.1PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)    
Predicted Functional Partners:
KGE18532.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.974
KGE16880.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.879
KGE20337.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.852
KGE17396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.851
KGE20090.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.839
KGE17127.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.838
KGE20889.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.833
KGE20135.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.831
KGE17148.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.829
KGE20127.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.822
Your Current Organism:
Paenibacillus wynnii
NCBI taxonomy Id: 268407
Other names: CIP 108306, DSM 18334, LMG 22176, LMG:22176, P. wynnii, Paenibacillus wynnii Rodriguez-Diaz et al. 2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.