STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGE18568.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
KGE19221.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
KGE17276.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.911
KGE20401.1
Histidine kinase; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.
 
 0.907
KGE20918.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.901
KGE19801.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.891
KGE16786.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.882
KGE20967.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.851
KGE17690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.824
KGE18553.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.820
KGE20965.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.751
Your Current Organism:
Paenibacillus wynnii
NCBI taxonomy Id: 268407
Other names: CIP 108306, DSM 18334, LMG 22176, LMG:22176, P. wynnii, Paenibacillus wynnii Rodriguez-Diaz et al. 2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.