STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGE18657.1Spore gernimation protein KA; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)    
Predicted Functional Partners:
KGE18658.1
Spore gernimation protein GerC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.945
KGE18659.1
Spore gernimation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.906
KGE17906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.784
KGE18679.1
SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.782
KGE18680.1
Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.781
KGE16706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.781
KGE17753.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.776
KGE19937.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
KGE17953.1
Peptidase S55; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
KGE18102.1
Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.772
Your Current Organism:
Paenibacillus wynnii
NCBI taxonomy Id: 268407
Other names: CIP 108306, DSM 18334, LMG 22176, LMG:22176, P. wynnii, Paenibacillus wynnii Rodriguez-Diaz et al. 2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.