Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KGE19306.1MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
KGE19172.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.733
KGE20155.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.639
KGE19305.1
DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.628
KGE16303.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
  0.605
KGE18701.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.479
KGE19357.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
KGE21020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
KGE20289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.453
KGE17343.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.449
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.449
Your Current Organism:
Paenibacillus wynnii
NCBI taxonomy Id: 268407
Other names: CIP 108306, DSM 18334, LMG 22176, LMG:22176, P. wynnii, Paenibacillus wynnii Rodriguez-Diaz et al. 2005
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