STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGE19652.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
KGE19655.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
KGE19654.1
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.964
KGE16849.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.950
KGE16850.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.934
KGE19653.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.926
KGE20273.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.882
KGE20274.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.881
KGE17357.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.814
KGE20272.1
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.681
KGE17358.1
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.667
Your Current Organism:
Paenibacillus wynnii
NCBI taxonomy Id: 268407
Other names: CIP 108306, DSM 18334, LMG 22176, LMG:22176, P. wynnii, Paenibacillus wynnii Rodriguez-Diaz et al. 2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.