STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGE16553.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)    
Predicted Functional Partners:
KGE17518.1
Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.981
KGE17509.1
Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.936
KGE19732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
KGE17690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
0.918
KGE17519.1
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.869
KGE20967.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.863
KGE18701.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.853
KGE20293.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.804
KGE18565.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.801
KGE17528.1
Flagellar biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.799
Your Current Organism:
Paenibacillus wynnii
NCBI taxonomy Id: 268407
Other names: CIP 108306, DSM 18334, LMG 22176, LMG:22176, P. wynnii, Paenibacillus wynnii Rodriguez-Diaz et al. 2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.