ddx46 protein (Trichinella papuae) - STRING interaction network

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Score

ddx46

Putative ATP-dependent RNA helicase DDX46. (990 aa)

Predicted Functional Partners:

T10_219

0.998

Sf3a2

0.998

SF3A1

0.998

sf3b1

0.998

SF3B2

0.990

DHX15

0.988

SF1

0.987

U2surp

0.983

sap-49

0.983

Ncbp2

0.982

Your Current Organism:

Trichinella papuae

NCBI taxonomy Id: 268474
Other names: T. papuae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHX15	Ncbp2	A0A0V1MN00	A0A0V1MJX1	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	0.758
DHX15	SF1	A0A0V1MN00	A0A0V1MWT8	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	Splicing factor 1.	0.723
DHX15	SF3A1	A0A0V1MN00	A0A0V1MYH1	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	Splicing factor 3A subunit 1.	0.937
DHX15	SF3B2	A0A0V1MN00	A0A0V1MFC6	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	Splicing factor 3B subunit 2.	0.834
DHX15	Sf3a2	A0A0V1MN00	A0A0V1MW51	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	Splicing factor 3A subunit 2.	0.879
DHX15	T10_219	A0A0V1MN00	A0A0V1M6E7	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	PHD finger-like domain-containing protein 5B.	0.986
DHX15	U2surp	A0A0V1MN00	A0A0V1MBI6	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	U2 snRNP-associated SURP motif-containing protein.	0.985
DHX15	ddx46	A0A0V1MN00	A0A0V1M7H9	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	Putative ATP-dependent RNA helicase DDX46.	0.988
DHX15	sap-49	A0A0V1MN00	A0A0V1N0H4	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	Splicing factor 3B subunit 4.	0.836
DHX15	sf3b1	A0A0V1MN00	A0A0V1N787	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	Splicing factor 3B subunit 1.	0.946
Ncbp2	DHX15	A0A0V1MJX1	A0A0V1MN00	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	0.758
Ncbp2	SF1	A0A0V1MJX1	A0A0V1MWT8	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Splicing factor 1.	0.639
Ncbp2	SF3A1	A0A0V1MJX1	A0A0V1MYH1	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Splicing factor 3A subunit 1.	0.992
Ncbp2	SF3B2	A0A0V1MJX1	A0A0V1MFC6	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Splicing factor 3B subunit 2.	0.994
Ncbp2	Sf3a2	A0A0V1MJX1	A0A0V1MW51	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Splicing factor 3A subunit 2.	0.993
Ncbp2	T10_219	A0A0V1MJX1	A0A0V1M6E7	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	PHD finger-like domain-containing protein 5B.	0.614
Ncbp2	ddx46	A0A0V1MJX1	A0A0V1M7H9	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Putative ATP-dependent RNA helicase DDX46.	0.982
Ncbp2	sap-49	A0A0V1MJX1	A0A0V1N0H4	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Splicing factor 3B subunit 4.	0.945
Ncbp2	sf3b1	A0A0V1MJX1	A0A0V1N787	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.	Splicing factor 3B subunit 1.	0.968
SF1	DHX15	A0A0V1MWT8	A0A0V1MN00	Splicing factor 1.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	0.723