STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfil3Nuclear factor interleukin-3-regulated protein. (387 aa)    
Predicted Functional Partners:
cco-2
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.880
COX6B-2
Cytochrome c oxidase subunit 6b-2.
   
 0.833
Cox6a1
Cytochrome c oxidase subunit 6A1, mitochondrial.
   
 0.833
COX4I1
Mitochondrial cytochrome c oxidase subunit.
   
 0.824
per
Period circadian protein.
   
 0.779
ATF5
Cyclic AMP-dependent transcription factor ATF-5.
   
 0.761
cht-1
Putative endochitinase; Belongs to the glycosyl hydrolase 18 family.
   
 0.698
cpg-2-3
Chondroitin proteoglycan 2.
   
 0.698
T10_871
Chitinase-like protein C25A8.4; Belongs to the glycosyl hydrolase 18 family.
   
 0.698
cht-1-2
Putative endochitinase; Belongs to the glycosyl hydrolase 18 family.
   
 0.698
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.