STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tspan1Tetraspanin. (298 aa)    
Predicted Functional Partners:
ina-1
Integrin alpha ina-1; Belongs to the integrin alpha chain family.
    
 0.579
pat-2
Integrin alpha pat-2; Belongs to the integrin alpha chain family.
    
 0.579
PTK7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.574
Rbmx2
Putative integrin beta-like protein.
    
 0.570
pat-3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.570
Pik3r3
Phosphatidylinositol 3-kinase regulatory subunit gamma.
    
  0.527
FGFR
Fibroblast growth factor receptor.
    
 0.524
rsrc2
Arginine/serine-rich coiled-coil protein 2.
    
 0.524
Flt1
Vascular endothelial growth factor receptor 1.
    
 0.524
FGFR3
Fibroblast growth factor receptor 3.
    
 0.524
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.