STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UVRAGUV radiation resistance-associated protein. (375 aa)    
Predicted Functional Partners:
Atg6
Beclin-1-like protein.
    
 0.999
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
    
 0.999
PIK3R4
Phosphoinositide 3-kinase regulatory subunit 4.
    
 0.998
Plekhm3
Pleckstrin homology domain-containing family M member 3.
    
 0.943
SH3GLB1
Endophilin-B1.
    
 0.911
RUFY2
RUN and FYVE domain-containing protein 2.
    
 0.821
SNX29
Sorting nexin-29.
    
 0.821
lgg-1
Protein lgg-1.
     
 0.773
Map1lc3b
Microtubule-associated proteins 1A/1B light chain 3B.
     
 0.651
Vps16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.650
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.